Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK04002
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209790 |
|---|---|
| Product ID | ORK04002 |
| Clone name | bm02973 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | AAMP |
| cDNA sequence | DNA sequence (2270 bp) Predicted protein sequence (233 aa) |
| Description | Angio-associated migratory cell protein. |
Length: 2270 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : YES Integrity of 3' end
| Length of 3'UTR | 1566 bp |
|---|---|
| Genome contig ID | gi89161199r_218737097 |
| PolyA signal sequence (AATAAA,-19) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 233 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR001680 | 81 | 120 | PF00400 | WD40 repeat |
| IPR001680 | 124 | 162 | PF00400 | WD40 repeat | |
| HMMSmart | IPR001680 | 80 | 120 | SM00320 | WD40 repeat |
| IPR001680 | 123 | 162 | SM00320 | WD40 repeat | |
| IPR001680 | 165 | 202 | SM00320 | WD40 repeat | |
| ProfileScan | IPR001680 | 87 | 129 | PS50082 | WD40 repeat |
| IPR001680 | 87 | 171 | PS50294 | WD40 repeat | |
| IPR001680 | 130 | 171 | PS50082 | WD40 repeat |
