Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07493
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AK226080 |
|---|---|
| Product ID | ORK07493 |
| Clone name | ej00969 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | ZNF544 |
| cDNA sequence | DNA sequence (4129 bp) Predicted protein sequence (642 aa) |
| Description | Zinc finger protein 544. |
Length: 4129 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : YES Integrity of 3' end
| Length of 3'UTR | 725 bp |
|---|---|
| Genome contig ID | gi42406306f_63332643 |
| PolyA signal sequence (AATAAA,-22) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (134016 - 134065) |
----+----*----+----*----+----*----+----*----+----* |
Length: 642 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 307 | 330 | PD000003 | Zinc finger |
| IPR007087 | 335 | 358 | PD000003 | Zinc finger | |
| IPR007087 | 363 | 386 | PD000003 | Zinc finger | |
| IPR007087 | 391 | 414 | PD000003 | Zinc finger | |
| IPR007087 | 419 | 442 | PD000003 | Zinc finger | |
| IPR007087 | 447 | 470 | PD000003 | Zinc finger | |
| IPR007087 | 475 | 498 | PD000003 | Zinc finger | |
| IPR007087 | 503 | 526 | PD000003 | Zinc finger | |
| IPR007087 | 531 | 554 | PD000003 | Zinc finger | |
| IPR007087 | 559 | 582 | PD000003 | Zinc finger | |
| IPR007087 | 587 | 610 | PD000003 | Zinc finger | |
| IPR007087 | 615 | 638 | PD000003 | Zinc finger | |
| HMMPfam | IPR007087 | 307 | 329 | PF00096 | Zinc finger |
| IPR007087 | 335 | 357 | PF00096 | Zinc finger | |
| IPR007087 | 363 | 385 | PF00096 | Zinc finger | |
| IPR007087 | 391 | 413 | PF00096 | Zinc finger | |
| IPR007087 | 419 | 441 | PF00096 | Zinc finger | |
| IPR007087 | 447 | 469 | PF00096 | Zinc finger | |
| IPR007087 | 475 | 497 | PF00096 | Zinc finger | |
| IPR007087 | 503 | 525 | PF00096 | Zinc finger | |
| IPR007087 | 531 | 553 | PF00096 | Zinc finger | |
| IPR007087 | 559 | 581 | PF00096 | Zinc finger | |
| IPR007087 | 587 | 609 | PF00096 | Zinc finger | |
| IPR007087 | 615 | 637 | PF00096 | Zinc finger | |
| HMMSmart | IPR015880 | 307 | 329 | SM00355 | Zinc finger |
| IPR015880 | 335 | 357 | SM00355 | Zinc finger | |
| IPR015880 | 363 | 385 | SM00355 | Zinc finger | |
| IPR015880 | 391 | 413 | SM00355 | Zinc finger | |
| IPR015880 | 419 | 441 | SM00355 | Zinc finger | |
| IPR015880 | 447 | 469 | SM00355 | Zinc finger | |
| IPR015880 | 475 | 497 | SM00355 | Zinc finger | |
| IPR015880 | 503 | 525 | SM00355 | Zinc finger | |
| IPR015880 | 531 | 553 | SM00355 | Zinc finger | |
| IPR015880 | 559 | 581 | SM00355 | Zinc finger | |
| IPR015880 | 587 | 609 | SM00355 | Zinc finger | |
| IPR015880 | 615 | 637 | SM00355 | Zinc finger | |
| ProfileScan | IPR007087 | 281 | 306 | PS50157 | Zinc finger |
| IPR007087 | 307 | 334 | PS50157 | Zinc finger | |
| IPR007087 | 335 | 362 | PS50157 | Zinc finger | |
| IPR007087 | 363 | 390 | PS50157 | Zinc finger | |
| IPR007087 | 391 | 418 | PS50157 | Zinc finger | |
| IPR007087 | 419 | 446 | PS50157 | Zinc finger | |
| IPR007087 | 447 | 474 | PS50157 | Zinc finger | |
| IPR007087 | 475 | 502 | PS50157 | Zinc finger | |
| IPR007087 | 503 | 530 | PS50157 | Zinc finger | |
| IPR007087 | 531 | 558 | PS50157 | Zinc finger | |
| IPR007087 | 559 | 586 | PS50157 | Zinc finger | |
| IPR007087 | 587 | 614 | PS50157 | Zinc finger | |
| IPR007087 | 615 | 642 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 309 | 329 | PS00028 | Zinc finger |
| IPR007087 | 337 | 357 | PS00028 | Zinc finger | |
| IPR007087 | 365 | 385 | PS00028 | Zinc finger | |
| IPR007087 | 393 | 413 | PS00028 | Zinc finger | |
| IPR007087 | 421 | 441 | PS00028 | Zinc finger | |
| IPR007087 | 449 | 469 | PS00028 | Zinc finger | |
| IPR007087 | 477 | 497 | PS00028 | Zinc finger | |
| IPR007087 | 505 | 525 | PS00028 | Zinc finger | |
| IPR007087 | 533 | 553 | PS00028 | Zinc finger | |
| IPR007087 | 561 | 581 | PS00028 | Zinc finger | |
| IPR007087 | 589 | 609 | PS00028 | Zinc finger | |
| IPR007087 | 617 | 637 | PS00028 | Zinc finger |
