ORK04708

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK04708

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Accession No	AB209486
Product ID	ORK04708
Clone name	ff01868
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	DBNL
cDNA sequence	DNA sequence (10027 bp) Predicted protein sequence (358 aa)
Description	Drebrin-like protein (SH3 domain-containing protein 7) (Drebrin-F) (Cervical SH3P7) (HPK1-interacting protein of 55 kDa) (HIP-55) (Cervical mucin-associated protein).

Features of the cloned cDNA sequence

Description

Length: 10027 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: YES

Warning for coding interruption : NO

Features of the protein sequence

Description

Length: 358 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD92723	1.8e-112	100.0	Drebrin-like pr...	Homo sapiens
AAG17262	1.3e-108	99.1	unknown [Homo s...	Homo sapiens
Q9UJU6	1.3e-108	99.1	Drebrin-like pr...	Homo sapiens
EAW61131	1.4e-108	99.1	drebrin-like, i...	Homo sapiens
CAG33448	2e-108	98.8	HIP-55 [Homo sa...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
BlastProDom	IPR001452	304	355	PD000066	Src homology-3
FPrintScan	IPR001452	302	312	PR00452	Src homology-3
	IPR001452	333	342	PR00452	Src homology-3
	IPR001452	345	357	PR00452	Src homology-3
HMMPfam	IPR002108	21	61	PF00241	Actin-binding
HMMPfam	IPR001452	302	357	PF00018	Src homology-3
HMMSmart	IPR001452	302	358	SM00326	Src homology-3
ProfileScan	IPR001452	299	358	PS50002	Src homology-3

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