Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK11851
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK11851 |
| Clone name | fh12350 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZNF223 |
| cDNA sequence | DNA sequence (5250 bp) Predicted protein sequence (477 aa) |
| Description | Zinc finger protein 223 |
Length: 5250 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 171 bp |
|---|---|
| Genome contig ID | gi42406306f_49152888 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (110555 - 110604) |
----+----*----+----*----+----*----+----*----+----* |
Length: 477 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 171 | 193 | PD000003 | Zinc finger |
| IPR007087 | 199 | 222 | PD000003 | Zinc finger | |
| IPR007087 | 227 | 249 | PD000003 | Zinc finger | |
| IPR007087 | 255 | 278 | PD000003 | Zinc finger | |
| IPR007087 | 339 | 362 | PD000003 | Zinc finger | |
| IPR007087 | 367 | 390 | PD000003 | Zinc finger | |
| IPR007087 | 395 | 417 | PD000003 | Zinc finger | |
| HMMPfam | IPR001909 | 3 | 43 | PF01352 | KRAB box |
| IPR007087 | 171 | 193 | PF00096 | Zinc finger | |
| IPR007087 | 199 | 221 | PF00096 | Zinc finger | |
| IPR007087 | 227 | 249 | PF00096 | Zinc finger | |
| IPR007087 | 255 | 277 | PF00096 | Zinc finger | |
| IPR007087 | 283 | 305 | PF00096 | Zinc finger | |
| IPR007087 | 339 | 361 | PF00096 | Zinc finger | |
| IPR007087 | 367 | 389 | PF00096 | Zinc finger | |
| IPR007087 | 395 | 417 | PF00096 | Zinc finger | |
| HMMSmart | IPR001909 | 3 | 62 | SM00349 | KRAB box |
| IPR015880 | 171 | 193 | SM00355 | Zinc finger | |
| IPR015880 | 199 | 221 | SM00355 | Zinc finger | |
| IPR015880 | 227 | 249 | SM00355 | Zinc finger | |
| IPR015880 | 255 | 277 | SM00355 | Zinc finger | |
| IPR015880 | 283 | 305 | SM00355 | Zinc finger | |
| IPR015880 | 339 | 361 | SM00355 | Zinc finger | |
| IPR015880 | 367 | 389 | SM00355 | Zinc finger | |
| IPR015880 | 395 | 417 | SM00355 | Zinc finger | |
| IPR015880 | 423 | 445 | SM00355 | Zinc finger | |
| ProfileScan | IPR001909 | 3 | 73 | PS50805 | KRAB box |
| IPR007087 | 171 | 198 | PS50157 | Zinc finger | |
| IPR007087 | 199 | 226 | PS50157 | Zinc finger | |
| IPR007087 | 227 | 254 | PS50157 | Zinc finger | |
| IPR007087 | 255 | 282 | PS50157 | Zinc finger | |
| IPR007087 | 283 | 310 | PS50157 | Zinc finger | |
| IPR007087 | 317 | 338 | PS50157 | Zinc finger | |
| IPR007087 | 339 | 366 | PS50157 | Zinc finger | |
| IPR007087 | 367 | 394 | PS50157 | Zinc finger | |
| IPR007087 | 395 | 422 | PS50157 | Zinc finger | |
| IPR007087 | 423 | 450 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 173 | 193 | PS00028 | Zinc finger |
| IPR007087 | 201 | 221 | PS00028 | Zinc finger | |
| IPR007087 | 229 | 249 | PS00028 | Zinc finger | |
| IPR007087 | 257 | 277 | PS00028 | Zinc finger | |
| IPR007087 | 285 | 305 | PS00028 | Zinc finger | |
| IPR007087 | 341 | 361 | PS00028 | Zinc finger | |
| IPR007087 | 369 | 389 | PS00028 | Zinc finger | |
| IPR007087 | 397 | 417 | PS00028 | Zinc finger |
