ORK06672

Kazusa Clone (Original Type)

Gene/Protein Characteristic Table for ORK06672

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Accession No	AB209196
Product ID	ORK06672
Clone name	fj02819
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
Symbol	RNH1
cDNA sequence	DNA sequence (3284 bp) Predicted protein sequence (319 aa)
Description	Ribonuclease inhibitor (Ribonuclease/angiogenin inhibitor 1) (RAI) (Placental ribonuclease inhibitor) (RNase inhibitor) (RI).

Features of the cloned cDNA sequence

Description

Length: 3284 bp

Physical map

Restriction map

Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.

Warning for N-terminal truncation: NO

Warning for coding interruption : YES

Features of the protein sequence

Description

Length: 319 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAD92433	2.9e-140	100.0	ribonuclease/an...	Homo sapiens
AAH11186	1.2e-137	99.6	RNH1 protein [H...	Homo sapiens
EAX02330	1.2e-137	99.6	ribonuclease/an...	Homo sapiens
1A4Y	1.2e-137	99.6	RIBONUCLEASE IN...	Homo sapiens
P13489	1.2e-137	99.6	Ribonuclease in...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
FPrintScan	IPR001611	201	214	PR00019	Leucine-rich repeat
FPrintScan	IPR001611	255	268	PR00019	Leucine-rich repeat
HMMPfam	IPR001611	257	277	PF00560	Leucine-rich repeat
HMMSmart	IPR003590	27	54	SM00368	Leucine-rich repeat
	IPR003590	56	83	SM00368	Leucine-rich repeat
	IPR003590	84	111	SM00368	Leucine-rich repeat
	IPR003590	113	140	SM00368	Leucine-rich repeat
	IPR003590	141	168	SM00368	Leucine-rich repeat
	IPR003590	170	197	SM00368	Leucine-rich repeat
	IPR003590	198	225	SM00368	Leucine-rich repeat
	IPR003590	227	254	SM00368	Leucine-rich repeat
	IPR003590	255	282	SM00368	Leucine-rich repeat

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