Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07520
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209516 |
|---|---|
| Product ID | ORK07520 |
| Clone name | fk08996 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ZNF83 |
| cDNA sequence | DNA sequence (3728 bp) Predicted protein sequence (535 aa) |
| Description | Zinc finger protein 83 (Zinc finger protein HPF1). |
Length: 3728 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 636 bp |
|---|---|
| Genome contig ID | gi42406306r_57707443 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 535 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| BlastProDom | IPR007087 | 140 | 163 | PD000003 | Zinc finger |
| IPR007087 | 168 | 191 | PD000003 | Zinc finger | |
| IPR007087 | 196 | 219 | PD000003 | Zinc finger | |
| IPR007087 | 224 | 247 | PD000003 | Zinc finger | |
| IPR007087 | 252 | 275 | PD000003 | Zinc finger | |
| IPR007087 | 280 | 303 | PD000003 | Zinc finger | |
| IPR007087 | 308 | 331 | PD000003 | Zinc finger | |
| IPR007087 | 336 | 359 | PD000003 | Zinc finger | |
| IPR007087 | 364 | 386 | PD000003 | Zinc finger | |
| IPR007087 | 392 | 415 | PD000003 | Zinc finger | |
| IPR007087 | 420 | 443 | PD000003 | Zinc finger | |
| IPR007087 | 448 | 471 | PD000003 | Zinc finger | |
| IPR007087 | 476 | 499 | PD000003 | Zinc finger | |
| IPR007087 | 504 | 524 | PD000003 | Zinc finger | |
| HMMPfam | IPR007087 | 140 | 162 | PF00096 | Zinc finger |
| IPR007087 | 168 | 190 | PF00096 | Zinc finger | |
| IPR007087 | 196 | 218 | PF00096 | Zinc finger | |
| IPR007087 | 224 | 246 | PF00096 | Zinc finger | |
| IPR007087 | 252 | 274 | PF00096 | Zinc finger | |
| IPR007087 | 280 | 302 | PF00096 | Zinc finger | |
| IPR007087 | 308 | 330 | PF00096 | Zinc finger | |
| IPR007087 | 336 | 358 | PF00096 | Zinc finger | |
| IPR007087 | 364 | 386 | PF00096 | Zinc finger | |
| IPR007087 | 392 | 414 | PF00096 | Zinc finger | |
| IPR007087 | 420 | 442 | PF00096 | Zinc finger | |
| IPR007087 | 448 | 470 | PF00096 | Zinc finger | |
| IPR007087 | 476 | 498 | PF00096 | Zinc finger | |
| IPR007087 | 504 | 526 | PF00096 | Zinc finger | |
| HMMSmart | IPR015880 | 112 | 134 | SM00355 | Zinc finger |
| IPR015880 | 140 | 162 | SM00355 | Zinc finger | |
| IPR015880 | 168 | 190 | SM00355 | Zinc finger | |
| IPR015880 | 196 | 218 | SM00355 | Zinc finger | |
| IPR015880 | 224 | 246 | SM00355 | Zinc finger | |
| IPR015880 | 252 | 274 | SM00355 | Zinc finger | |
| IPR015880 | 280 | 302 | SM00355 | Zinc finger | |
| IPR015880 | 308 | 330 | SM00355 | Zinc finger | |
| IPR015880 | 336 | 358 | SM00355 | Zinc finger | |
| IPR015880 | 364 | 386 | SM00355 | Zinc finger | |
| IPR015880 | 392 | 414 | SM00355 | Zinc finger | |
| IPR015880 | 420 | 442 | SM00355 | Zinc finger | |
| IPR015880 | 448 | 470 | SM00355 | Zinc finger | |
| IPR015880 | 476 | 498 | SM00355 | Zinc finger | |
| IPR015880 | 504 | 526 | SM00355 | Zinc finger | |
| ProfileScan | IPR007087 | 112 | 139 | PS50157 | Zinc finger |
| IPR007087 | 140 | 167 | PS50157 | Zinc finger | |
| IPR007087 | 168 | 195 | PS50157 | Zinc finger | |
| IPR007087 | 196 | 223 | PS50157 | Zinc finger | |
| IPR007087 | 224 | 251 | PS50157 | Zinc finger | |
| IPR007087 | 252 | 279 | PS50157 | Zinc finger | |
| IPR007087 | 280 | 307 | PS50157 | Zinc finger | |
| IPR007087 | 308 | 335 | PS50157 | Zinc finger | |
| IPR007087 | 336 | 363 | PS50157 | Zinc finger | |
| IPR007087 | 364 | 391 | PS50157 | Zinc finger | |
| IPR007087 | 392 | 419 | PS50157 | Zinc finger | |
| IPR007087 | 420 | 447 | PS50157 | Zinc finger | |
| IPR007087 | 448 | 475 | PS50157 | Zinc finger | |
| IPR007087 | 476 | 503 | PS50157 | Zinc finger | |
| IPR007087 | 504 | 531 | PS50157 | Zinc finger | |
| ScanRegExp | IPR007087 | 142 | 162 | PS00028 | Zinc finger |
| IPR007087 | 170 | 190 | PS00028 | Zinc finger | |
| IPR007087 | 198 | 218 | PS00028 | Zinc finger | |
| IPR007087 | 226 | 246 | PS00028 | Zinc finger | |
| IPR007087 | 254 | 274 | PS00028 | Zinc finger | |
| IPR007087 | 282 | 302 | PS00028 | Zinc finger | |
| IPR007087 | 310 | 330 | PS00028 | Zinc finger | |
| IPR007087 | 338 | 358 | PS00028 | Zinc finger | |
| IPR007087 | 366 | 386 | PS00028 | Zinc finger | |
| IPR007087 | 394 | 414 | PS00028 | Zinc finger | |
| IPR007087 | 422 | 442 | PS00028 | Zinc finger | |
| IPR007087 | 450 | 470 | PS00028 | Zinc finger | |
| IPR007087 | 478 | 498 | PS00028 | Zinc finger | |
| IPR007087 | 506 | 526 | PS00028 | Zinc finger |
