Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK04223
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB208828 |
|---|---|
| Product ID | ORK04223 |
| Clone name | hj01066 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | ATP7A |
| cDNA sequence | DNA sequence (5296 bp) Predicted protein sequence (682 aa) |
| Description | Copper-transporting ATPase 1 (EC 3.6.3.4) (Copper pump 1) (Menkes disease-associated protein). |
Length: 5296 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 3176 bp |
|---|---|
| Genome contig ID | gi89161218f_76952909 |
| PolyA signal sequence (None) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (201836 - 201885) |
----+----*----+----*----+----*----+----*----+----* |
Length: 682 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR001802 | 16 | 27 | PR00946 | Mercury scavenger protein |
| IPR001802 | 27 | 43 | PR00946 | Mercury scavenger protein | |
| IPR001877 | 30 | 48 | PR00942 | Copper-transporting ATPase 1 | |
| IPR001802 | 43 | 58 | PR00946 | Mercury scavenger protein | |
| IPR001877 | 48 | 65 | PR00942 | Copper-transporting ATPase 1 | |
| IPR001802 | 72 | 86 | PR00946 | Mercury scavenger protein | |
| IPR001877 | 499 | 524 | PR00942 | Copper-transporting ATPase 1 | |
| IPR001877 | 525 | 548 | PR00942 | Copper-transporting ATPase 1 | |
| IPR001877 | 554 | 574 | PR00942 | Copper-transporting ATPase 1 | |
| IPR001877 | 598 | 619 | PR00942 | Copper-transporting ATPase 1 | |
| HMMPfam | IPR006121 | 21 | 85 | PF00403 | Heavy metal transport/detoxification protein |
| IPR006121 | 184 | 248 | PF00403 | Heavy metal transport/detoxification protein | |
| IPR006121 | 290 | 354 | PF00403 | Heavy metal transport/detoxification protein | |
| IPR006121 | 390 | 454 | PF00403 | Heavy metal transport/detoxification protein | |
| IPR006121 | 501 | 565 | PF00403 | Heavy metal transport/detoxification protein | |
| IPR006121 | 577 | 641 | PF00403 | Heavy metal transport/detoxification protein | |
| HMMTigr | IPR006122 | 19 | 84 | TIGR00003 | Copper ion-binding |
| IPR006122 | 499 | 564 | TIGR00003 | Copper ion-binding | |
| ProfileScan | IPR006121 | 19 | 85 | PS50846 | Heavy metal transport/detoxification protein |
| IPR006121 | 182 | 248 | PS50846 | Heavy metal transport/detoxification protein | |
| IPR006121 | 288 | 354 | PS50846 | Heavy metal transport/detoxification protein | |
| IPR006121 | 388 | 454 | PS50846 | Heavy metal transport/detoxification protein | |
| IPR006121 | 499 | 565 | PS50846 | Heavy metal transport/detoxification protein | |
| IPR006121 | 575 | 633 | PS50846 | Heavy metal transport/detoxification protein | |
| ScanRegExp | IPR006121 | 24 | 53 | PS01047 | Heavy metal transport/detoxification protein |
| IPR006121 | 187 | 216 | PS01047 | Heavy metal transport/detoxification protein | |
| IPR006121 | 293 | 322 | PS01047 | Heavy metal transport/detoxification protein | |
| IPR006121 | 393 | 422 | PS01047 | Heavy metal transport/detoxification protein | |
| IPR006121 | 504 | 533 | PS01047 | Heavy metal transport/detoxification protein | |
| IPR006121 | 580 | 609 | PS01047 | Heavy metal transport/detoxification protein |
