Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK00320
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Accession No AB210041
Product ID ORK00320
Clone name pf00482
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol MPDZ
cDNA sequence DNA sequence (7604 bp)
Predicted protein sequence (2045 aa)
Flexi ORF Clone FXC00320
Description Multiple PDZ domain protein (Multi-PDZ domain protein 1).
Features of the cloned cDNA sequence

Length: 7604 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1255 bp
Genome contig ID gi89161216r_12995709
PolyA signal sequence
(AATAAA,-27)		 
+----*----+----*----+----*----+----
TTAAAGTGAATAAATAAGAATTTTCAGTGGTGCAC
Flanking genome sequence
(100000 - 99951)		 
----+----*----+----*----+----*----+----*----+----*
AAATAAGCAGCAAGCATTTTTTTTGTTCTTTTTACTGTGGAAAAGCTTTG

Features of the protein sequence

Length: 2045 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAE06123 0 100.0 MPDZ variant pr...
 Homo sapiens
BAG10538 0 100.0 multiple PDZ do...
 synthetic construct
O75970 0 99.3 Multiple PDZ do...
 Homo sapiens
XP_528539 0 97.7 multiple PDZ do...
 Pan troglodytes
XP_001146562 0 97.1 multiple PDZ do...
 Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR015132 10 67 PF09045 L27_2
IPR001478 141 225 PF00595 PDZ/DHR/GLGF
IPR001478 261 338 PF00595 PDZ/DHR/GLGF
IPR001478 381 464 PF00595 PDZ/DHR/GLGF
IPR001478 559 635 PF00595 PDZ/DHR/GLGF
IPR001478 704 788 PF00595 PDZ/DHR/GLGF
IPR001478 1012 1080 PF00595 PDZ/DHR/GLGF
IPR001478 1155 1244 PF00595 PDZ/DHR/GLGF
IPR001478 1354 1434 PF00595 PDZ/DHR/GLGF
IPR001478 1487 1565 PF00595 PDZ/DHR/GLGF
IPR001478 1633 1713 PF00595 PDZ/DHR/GLGF
IPR001478 1729 1797 PF00595 PDZ/DHR/GLGF
IPR001478 1837 1920 PF00595 PDZ/DHR/GLGF
IPR001478 1962 2044 PF00595 PDZ/DHR/GLGF
HMMSmart IPR001478 150 228 SM00228 PDZ/DHR/GLGF
IPR001478 269 341 SM00228 PDZ/DHR/GLGF
IPR001478 389 467 SM00228 PDZ/DHR/GLGF
IPR001478 567 638 SM00228 PDZ/DHR/GLGF
IPR001478 712 791 SM00228 PDZ/DHR/GLGF
IPR001478 1020 1096 SM00228 PDZ/DHR/GLGF
IPR001478 1164 1247 SM00228 PDZ/DHR/GLGF
IPR001478 1362 1437 SM00228 PDZ/DHR/GLGF
IPR001478 1495 1568 SM00228 PDZ/DHR/GLGF
IPR001478 1641 1716 SM00228 PDZ/DHR/GLGF
IPR001478 1738 1814 SM00228 PDZ/DHR/GLGF
IPR001478 1846 1923 SM00228 PDZ/DHR/GLGF
IPR001478 1970 2045 SM00228 PDZ/DHR/GLGF
ProfileScan IPR004172 7 67 PS51022 L27
IPR001478 141 228 PS50106 PDZ/DHR/GLGF
IPR001478 261 341 PS50106 PDZ/DHR/GLGF
IPR001478 381 467 PS50106 PDZ/DHR/GLGF
IPR001478 557 638 PS50106 PDZ/DHR/GLGF
IPR001478 704 780 PS50106 PDZ/DHR/GLGF
IPR001478 1012 1080 PS50106 PDZ/DHR/GLGF
IPR001478 1155 1243 PS50106 PDZ/DHR/GLGF
IPR001478 1354 1437 PS50106 PDZ/DHR/GLGF
IPR001478 1487 1568 PS50106 PDZ/DHR/GLGF
IPR001478 1633 1716 PS50106 PDZ/DHR/GLGF
IPR001478 1729 1804 PS50106 PDZ/DHR/GLGF
IPR001478 1837 1923 PS50106 PDZ/DHR/GLGF
IPR001478 1962 2045 PS50106 PDZ/DHR/GLGF
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