Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK00324
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK00324 |
| Clone name | sh02642 |
| Vector information |
The cDNA fragment was inserted at the SalI-NotI site of
the ...
|
| Symbol | MYOM2 |
| cDNA sequence | DNA sequence (4945 bp) Predicted protein sequence (1486 aa) |
|
HaloTag ORF Clone |
FHC00324
|
| Flexi ORF Clone | FXC00324 |
| Description | Myomesin-2 (M-protein) (165 kDa titin-associated protein) (165 kDa connectin-associated protein). |
Length: 4945 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 474 bp |
|---|---|
| Genome contig ID | gi51511724f_1880630 |
| PolyA signal sequence (AATAAA,-18) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (200158 - 200207) |
----+----*----+----*----+----*----+----*----+----* |
Length: 1486 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR003962 | 546 | 555 | PR00014 | Fibronectin |
| IPR003962 | 760 | 770 | PR00014 | Fibronectin | |
| IPR003962 | 784 | 802 | PR00014 | Fibronectin | |
| IPR003962 | 904 | 918 | PR00014 | Fibronectin | |
| HMMPfam | IPR013098 | 175 | 267 | PF07679 | Immunoglobulin I-set |
| IPR013098 | 299 | 393 | PF07679 | Immunoglobulin I-set | |
| IPR003961 | 404 | 490 | PF00041 | Fibronectin | |
| IPR003961 | 532 | 618 | PF00041 | Fibronectin | |
| IPR003961 | 633 | 717 | PF00041 | Fibronectin | |
| IPR003961 | 732 | 818 | PF00041 | Fibronectin | |
| IPR003961 | 834 | 920 | PF00041 | Fibronectin | |
| IPR013098 | 1366 | 1456 | PF07679 | Immunoglobulin I-set | |
| HMMSmart | IPR003599 | 181 | 268 | SM00409 | Immunoglobulin subtype |
| IPR003598 | 191 | 257 | SM00408 | Immunoglobulin subtype 2 | |
| IPR003599 | 305 | 394 | SM00409 | Immunoglobulin subtype | |
| IPR003598 | 311 | 383 | SM00408 | Immunoglobulin subtype 2 | |
| IPR003961 | 404 | 487 | SM00060 | Fibronectin | |
| IPR003961 | 532 | 615 | SM00060 | Fibronectin | |
| IPR003961 | 633 | 714 | SM00060 | Fibronectin | |
| IPR003961 | 732 | 815 | SM00060 | Fibronectin | |
| IPR003961 | 834 | 917 | SM00060 | Fibronectin | |
| IPR003599 | 934 | 1020 | SM00409 | Immunoglobulin subtype | |
| IPR003599 | 1156 | 1236 | SM00409 | Immunoglobulin subtype | |
| IPR003599 | 1372 | 1457 | SM00409 | Immunoglobulin subtype | |
| IPR003598 | 1378 | 1446 | SM00408 | Immunoglobulin subtype 2 | |
| ProfileScan | IPR007110 | 175 | 266 | PS50835 | Immunoglobulin-like |
| IPR007110 | 287 | 375 | PS50835 | Immunoglobulin-like | |
| IPR003961 | 404 | 496 | PS50853 | Fibronectin | |
| IPR003961 | 532 | 624 | PS50853 | Fibronectin | |
| IPR003961 | 633 | 723 | PS50853 | Fibronectin | |
| IPR003961 | 732 | 824 | PS50853 | Fibronectin | |
| IPR003961 | 834 | 926 | PS50853 | Fibronectin | |
| IPR007110 | 925 | 1023 | PS50835 | Immunoglobulin-like | |
| IPR007110 | 1151 | 1232 | PS50835 | Immunoglobulin-like | |
| IPR007110 | 1379 | 1455 | PS50835 | Immunoglobulin-like | |
| ScanRegExp | IPR000834 | 19 | 29 | PS00133 | Peptidase M14 |
