Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK00069
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Accession No
Product ID ORK00069
Clone name hg02120s1
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol SRGAP3
cDNA sequence DNA sequence (6929 bp)
Predicted protein sequence (1109 aa)
Flexi ORF Clone FXC00069
Description SLIT-ROBO Rho GTPase activating protein 3
Features of the cloned cDNA sequence

Length: 6929 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 3027 bp
Genome contig ID gi89161205r_8899176
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 1109 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAN57784 0 100.0 WAVE-associated...
Homo sapiens
XP_590495 0 99.5 similar to SLIT...
Bos taurus
XP_001495819 0 99.4 SLIT-ROBO Rho G...
Equus caballus
XP_001097317 0 98.9 similar to SLIT...
Macaca mulatta
EAW63950 0 100.0 SLIT-ROBO Rho G...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR001452 759 808 PD000066 Src homology-3
FPrintScan IPR001452 771 786 PR00452 Src homology-3
IPR001452 788 797 PR00452 Src homology-3
IPR001452 799 811 PR00452 Src homology-3
HMMPfam IPR001060 56 154 PF00611 Cdc15/Fes/CIP4
IPR000198 530 683 PF00620 RhoGAP
IPR001452 757 811 PF00018 Src homology-3
HMMSmart IPR001060 56 154 SM00055 Cdc15/Fes/CIP4
IPR000198 527 701 SM00324 RhoGAP
IPR001452 757 812 SM00326 Src homology-3
ProfileScan IPR001060 56 121 PS50133 Cdc15/Fes/CIP4
IPR000198 516 704 PS50238 RhoGAP
IPR001452 754 813 PS50002 Src homology-3
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