Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01423
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Accession No AB209558
Product ID ORK01423
Clone name fk13476
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol SRSF1
cDNA sequence DNA sequence (2953 bp)
Predicted protein sequence (233 aa)
Flexi ORF Clone FXC01423
Description Splicing factor, arginine/serine-rich 1 (pre-mRNA-splicing factor SF2, P33 subunit) (Alternative-splicing factor 1) (ASF-1).
Features of the cloned cDNA sequence

Length: 2953 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 2251 bp
Genome contig ID gi51511734r_53335854
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Features of the protein sequence

Length: 233 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92795 1.7e-85 100.0 splicing factor...
Homo sapiens
XP_523806 3.3e-78 97.3 similar to spli...
Pan troglodytes
XP_001103473 1.2e-77 96.8 similar to spli...
Macaca mulatta
AAH33785 8e-74 100.0 SFRS1 protein [...
Homo sapiens
BAC37367 6.1e-72 98.5 unnamed protein...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000504 50 118 PF00076 RNA recognition motif
IPR000504 155 219 PF00076 RNA recognition motif
HMMSmart IPR000504 49 119 SM00360 RNA recognition motif
IPR000504 154 220 SM00360 RNA recognition motif
ProfileScan IPR000504 48 123 PS50102 RNA recognition motif
IPR000504 153 222 PS50102 RNA recognition motif
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