Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01518
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Accession No
Product ID ORK01518
Clone name bm05157
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol XRCC6
cDNA sequence DNA sequence (2108 bp)
Predicted protein sequence (613 aa)
Flexi ORF Clone FXC01518
Description X-ray repair complementing defective repair in Chinese hamster cells 6
Features of the cloned cDNA sequence

Length: 2108 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 223 bp
Genome contig ID gi89161203f_40247256
PolyA signal sequence
Flanking genome sequence
(142734 - 142783)

Features of the protein sequence

Length: 613 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P12956 0 100.0 ATP-dependent D...
Homo sapiens
CAG47015 0 99.8 G22P1 [Homo sap...
Homo sapiens
BAG37986 0 99.6 unnamed protein...
Homo sapiens
BAE01402 0 99.1 unnamed protein...
Macaca fascicularis
CAH93208 0 99.1 hypothetical pr...
Pongo abelii
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR005161 41 260 PF03731 Ku70/Ku80
IPR006164 265 472 PF02735 DNA helicase
IPR005160 475 563 PF03730 Ku70/Ku80 C-terminal arm
IPR003034 577 611 PF02037 DNA-binding SAP
HMMSmart IPR006164 312 458 SM00559 DNA helicase
IPR003034 577 611 SM00513 DNA-binding SAP
HMMTigr IPR006165 28 612 TIGR00578 DNA helicase
ProfileScan IPR003034 577 611 PS50800 DNA-binding SAP
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