Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK01523
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | |
|---|---|
| Product ID | ORK01523 |
| Clone name | bm05530 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site of the ...
|
| Symbol | ACTB |
| cDNA sequence | DNA sequence (1793 bp) Predicted protein sequence (396 aa) |
|
HaloTag ORF Clone |
FHC01523
|
| Flexi ORF Clone | FXC01523 |
| Description | Actin, cytoplasmic 1 (Beta-actin). |
Length: 1793 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: YES Warning for coding interruption : NO
Length: 396 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| FPrintScan | IPR004000 | 47 | 56 | PR00190 | Actin/actin-like |
| IPR004000 | 70 | 81 | PR00190 | Actin/actin-like | |
| IPR004000 | 82 | 104 | PR00190 | Actin/actin-like | |
| IPR004000 | 136 | 149 | PR00190 | Actin/actin-like | |
| IPR004000 | 161 | 180 | PR00190 | Actin/actin-like | |
| IPR004000 | 257 | 273 | PR00190 | Actin/actin-like | |
| HMMPfam | IPR004000 | 23 | 396 | PF00022 | Actin/actin-like |
| HMMSmart | IPR004000 | 26 | 396 | SM00268 | Actin/actin-like |
| ScanRegExp | IPR004001 | 74 | 84 | PS00406 | Actin |
| IPR004000 | 125 | 137 | PS01132 | Actin/actin-like | |
| IPR004001 | 377 | 385 | PS00432 | Actin |
