Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01523
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Accession No
Product ID ORK01523
Clone name bm05530
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol ACTB
cDNA sequence DNA sequence (1793 bp)
Predicted protein sequence (396 aa)
Flexi ORF Clone FXC01523
Description Actin, cytoplasmic 1 (Beta-actin).
Features of the cloned cDNA sequence

Length: 1793 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Features of the protein sequence

Length: 396 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
AAS55927 3.5e-162 96.7 cytoskeletal be...
Sus scrofa
Q5R6G0 1.2e-160 100.0 Actin, cytoplas...
Pongo abelii
AAV38735 1.2e-160 100.0 actin, beta [sy...
synthetic construct
BAD96645 1.4e-160 99.7 beta actin vari...
Homo sapiens
CAA25004 1.9e-160 99.7 beta-actin [Gal...
Gallus gallus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR004000 47 56 PR00190 Actin/actin-like
IPR004000 70 81 PR00190 Actin/actin-like
IPR004000 82 104 PR00190 Actin/actin-like
IPR004000 136 149 PR00190 Actin/actin-like
IPR004000 161 180 PR00190 Actin/actin-like
IPR004000 257 273 PR00190 Actin/actin-like
HMMPfam IPR004000 23 396 PF00022 Actin/actin-like
HMMSmart IPR004000 26 396 SM00268 Actin/actin-like
ScanRegExp IPR004001 74 84 PS00406 Actin
IPR004000 125 137 PS01132 Actin/actin-like
IPR004001 377 385 PS00432 Actin
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