Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01758
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Accession No
Product ID ORK01758
Clone name fj18320
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol SKP2
cDNA sequence DNA sequence (3413 bp)
Predicted protein sequence (431 aa)
Flexi ORF Clone FXC01758
Description S-phase kinase-associated protein 2 (F-box protein Skp2) (Cyclin A/CDK2-associated protein p45) (p45skp2) (F-box/LRR-repeat protein 1).
Features of the cloned cDNA sequence

Length: 3413 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 1995 bp
Genome contig ID gi51511721f_36087979
PolyA signal sequence
(AATAAA,-18)
+----*----+----*----+----*----+----
TAGACTTGTTTTAAAACAATAAAACACATTTTTAT
Flanking genome sequence
(131906 - 131955)
----+----*----+----*----+----*----+----*----+----*
AAAAATGAGTGCTTAAACTAAGTTGTATTCCTTTTTTCTTTCTCTTTTTT

Features of the protein sequence

Length: 431 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q13309 6.9e-180 100.0 S-phase kinase-...
Homo sapiens
AAX41540 2.7e-179 99.7 S-phase kinase-...
synthetic construct
AAC50242 6.7e-177 96.9 cyclin A/CDK2-a...
Homo sapiens
XP_001499872 5.8e-169 92.9 S-phase kinase-...
Equus caballus
XP_546346 1.2e-168 92.1 similar to S-ph...
Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001810 102 149 PF00646 Cyclin-like F-box
IPR013101 238 263 PF07723 Leucine-rich repeat 2
HMMSmart IPR001810 107 147 SM00256 Cyclin-like F-box
IPR006553 212 236 SM00367 Leucine-rich repeat
IPR006553 237 261 SM00367 Leucine-rich repeat
IPR006553 262 291 SM00367 Leucine-rich repeat
IPR006553 316 341 SM00367 Leucine-rich repeat
IPR006553 342 366 SM00367 Leucine-rich repeat
ProfileScan IPR001810 101 147 PS50181 Cyclin-like F-box
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