Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK01776
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Accession No
Product ID ORK01776
Clone name fk10490
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol POU3F2
cDNA sequence DNA sequence (3616 bp)
Predicted protein sequence (319 aa)
Flexi ORF Clone FXC01776
Description POU domain, class 3, transcription factor 2 (Nervous system-specific octamer-binding transcription factor N-Oct-3) (Brain-specific homeobox/POU domain protein 2) (Brain-2) (Protein Brn-2).
Features of the cloned cDNA sequence

Length: 3616 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 2585 bp
Genome contig ID gi89161210f_99289292
PolyA signal sequence
Flanking genome sequence
(104096 - 104145)

Features of the protein sequence

Length: 319 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAG11394 5.1e-98 100.0 POU domain, cla...
synthetic construct
XP_001501398 4.3e-92 95.5 similar to POU ...
Equus caballus
AAI12697 9.3e-76 60.2 POU class 3 hom...
Bos taurus
CAA77990 1.6e-75 59.5 N-Oct 3 octamer...
Homo sapiens
AAB59611 1.6e-75 59.8 POU-domain tran...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom IPR000327 142 212 PD000583 POU-specific
IPR001356 230 286 PD000010 Homeobox
FPrintScan IPR013847 157 174 PR00028 POU
IPR013847 180 193 PR00028 POU
IPR013847 196 211 PR00028 POU
IPR013847 229 249 PR00028 POU
IPR013847 264 279 PR00028 POU
IPR001356 267 277 PR00024 Homeobox
IPR001356 277 286 PR00024 Homeobox
HMMPfam IPR000327 138 212 PF00157 POU-specific
IPR001356 231 287 PF00046 Homeobox
HMMSmart IPR000327 138 212 SM00352 POU-specific
IPR001356 230 292 SM00389 Homeobox
ProfileScan IPR000327 138 212 PS51179 POU-specific
IPR001356 228 288 PS50071 Homeobox
ScanRegExp IPR000327 156 168 PS00035 POU-specific
IPR000327 180 193 PS00465 POU-specific
IPR001356 263 286 PS00027 Homeobox
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