Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for
ORK07557
Order Kazusa clone(s) from : 
Japan
||
Other countries |
| Accession No | AB209827 |
|---|---|
| Product ID | ORK07557 |
| Clone name | bm05002 |
| Vector information |
The cDNA fragment was inserted at the XhoI-SacI site
of the ...
|
| Symbol | CPNE1 |
| cDNA sequence | DNA sequence (1937 bp) Predicted protein sequence (517 aa) |
| Description | Homo sapiens mRNA for copine I variant protein. |
Length: 1937 bp Physical map
Restriction map Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq. Warning for N-terminal truncation: NO Warning for coding interruption : NO Integrity of 3' end
| Length of 3'UTR | 195 bp |
|---|---|
| Genome contig ID | gi51511747r_33577382 |
| PolyA signal sequence (AATAAA,-20) |
+----*----+----*----+----*----+---- |
| Flanking genome sequence (100000 - 99951) |
----+----*----+----*----+----*----+----*----+----* |
Length: 517 aa
Result of homology search against nr database
(FASTA output,
Multiple alignment) |
|
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)
Result of InterProScan
| Search method | interpro_ID | From | To | Entry | Definition |
|---|---|---|---|---|---|
| HMMPfam | IPR000008 | 11 | 102 | PF00168 | C2 calcium-dependent membrane targeting |
| IPR000008 | 132 | 208 | PF00168 | C2 calcium-dependent membrane targeting | |
| IPR010734 | 284 | 431 | PF07002 | Copine | |
| HMMSmart | IPR000008 | 10 | 117 | SM00239 | C2 calcium-dependent membrane targeting |
| IPR000008 | 128 | 223 | SM00239 | C2 calcium-dependent membrane targeting | |
| IPR002035 | 263 | 465 | SM00327 | von Willebrand factor |
