Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK10436
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Accession No
Product ID ORK10436
Clone name pf01112
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol RAB30
cDNA sequence DNA sequence (1129 bp)
Predicted protein sequence (203 aa)
Flexi ORF Clone FXC10436
Description Ras-related protein Rab-30
Features of the cloned cDNA sequence

Length: 1129 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 349 bp
Genome contig ID gi51511727r_82270506
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
GGGAAATGTACTGTAGGGATCCCTCCTGCACATCA
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
GTGGGTGCATGTGGGAACTCTTCTTTAGGGCTTCGGTGGTAATCATCTGG

Features of the protein sequence

Length: 203 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q15771 7.4e-82 100.0 Ras-related pro...
Homo sapiens
XP_001377113 1.9e-81 99.5 similar to RAB3...
Monodelphis dom...
AAC50774 3e-81 99.5 Rab30 [Homo sap...
Homo sapiens
BAB30625 4.8e-81 99.5 unnamed protein...
Mus musculus
XP_002187756 7.8e-81 98.5 similar to RAB3...
Taeniopygia guttata
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001806 10 31 PR00449 Ras GTPase
IPR001806 33 49 PR00449 Ras GTPase
IPR001806 51 73 PR00449 Ras GTPase
IPR001806 113 126 PR00449 Ras GTPase
IPR001806 148 170 PR00449 Ras GTPase
HMMPfam IPR013753 11 172 PF00071 Ras
HMMSmart IPR003577 7 173 SM00173 Ras small GTPase
IPR003579 10 173 SM00175 Ras small GTPase
IPR003578 12 174 SM00174 Ras small GTPase
IPR002041 15 194 SM00176 Ran GTPase
HMMTigr IPR005225 7 168 TIGR00231 Small GTP-binding protein domain
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