Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK11634
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Accession No
Product ID ORK11634
Clone name eh00660
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol OSMR
cDNA sequence DNA sequence (5459 bp)
Predicted protein sequence (983 aa)
Flexi ORF Clone FXC11634
Description oncostatin M receptor
Features of the cloned cDNA sequence

Length: 5459 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Integrity of 3' end
Length of 3'UTR 2182 bp
Genome contig ID gi51511721f_38781923
PolyA signal sequence
(AATAAA,-19)
+----*----+----*----+----*----+----
TCATTTTTGCTATTGAAATAAACCTTAATTAAAAT
Flanking genome sequence
(189567 - 189616)
----+----*----+----*----+----*----+----*----+----*
ATTTCATCATCACATTGTGTTTTATCTCCCTCAATGAAATGAAAATCTAG

Features of the protein sequence

Length: 983 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q99650 0 100.0 Oncostatin-M-sp...
Homo sapiens
XP_001141406 0 99.0 oncostatin M re...
Pan troglodytes
XP_001083745 0 94.5 similar to onco...
Macaca mulatta
XP_001497043 0 75.4 oncostatin M re...
Equus caballus
XP_546341 0 72.2 similar to onco...
Canis lupus fam...
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR003961 438 522 PF00041 Fibronectin
IPR003961 543 614 PF00041 Fibronectin
IPR003961 626 730 PF00041 Fibronectin
HMMSmart IPR003961 337 417 SM00060 Fibronectin
IPR003961 435 519 SM00060 Fibronectin
IPR003961 527 614 SM00060 Fibronectin
IPR003961 626 727 SM00060 Fibronectin
ProfileScan IPR003961 336 428 PS50853 Fibronectin
IPR003961 434 528 PS50853 Fibronectin
IPR003961 530 623 PS50853 Fibronectin
IPR003961 629 736 PS50853 Fibronectin
ScanRegExp IPR001005 136 144 PS00037 SANT
IPR003529 514 565 PS01353 Long hematopoietin receptor

Prediction of transmembrane (TM) segments
Method No. N terminal transmembrane region C terminal type length
SOSUI2 1 4 LMALFAVFQTTFFLTLLSLR 23 SECONDARY 20
2 744 MLIHILLPMVFCVLLIMVMCYLK 766 PRIMARY 23
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