Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK06516
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Accession No AB209036
Product ID ORK06516
Clone name hh01241
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
Symbol PSMC5
cDNA sequence DNA sequence (5749 bp)
Predicted protein sequence (345 aa)
Description 26S protease regulatory subunit 8 (Proteasome 26S subunit ATPase 5) (Proteasome subunit p45) (p45/SUG) (Thyroid hormone receptor- interacting protein 1) (TRIP1).
Features of the cloned cDNA sequence

Length: 5749 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: NO
Warning for coding interruption : NO
Features of the protein sequence

Length: 345 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD92273 7.8e-125 100.0 proteasome 26S ...
Homo sapiens
XP_001108909 1.5e-115 96.1 similar to for ...
Macaca mulatta
BAB26990 7.1e-115 96.1 unnamed protein...
Mus musculus
XP_001149845 7.1e-115 96.1 similar to mSUG...
Pan troglodytes
P62197 7.1e-115 96.1 26S protease re...
Sus scrofa
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR003959 181 322 PF00004 AAA ATPase
HMMSmart IPR003593 178 317 SM00382 AAA+ ATPase
HMMTigr IPR005937 24 343 TIGR01242 26S proteasome subunit P45
ScanRegExp IPR003960 285 303 PS00674 AAA ATPase
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