Kazusa Clone (Original Type)
Gene/Protein Characteristic Table for ORK06568
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Accession No AB209767
Product ID ORK06568
Clone name bm01113
Vector information
The cDNA fragment was inserted at the XhoI-SacI site of the ...
Symbol RAB8A
cDNA sequence DNA sequence (1754 bp)
Predicted protein sequence (152 aa)
Description Ras-related protein Rab-8A (Oncogene c-mel).
Features of the cloned cDNA sequence

Length: 1754 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis) for : cloned DNA seq.
Warning for N-terminal truncation: YES
Warning for coding interruption : NO
Features of the protein sequence

Length: 152 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAD93004 3.5e-65 100.0 mel transformin...
 Homo sapiens
BAE89423 3.8e-40 76.0 unnamed protein...
 Macaca fascicularis
EDL10785 4.5e-40 95.5 RAB8A, member R...
 Mus musculus
2FU5 1.4e-38 100.0

EDL10787 1.4e-38 100.0 RAB8A, member R...
 Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR001806 4 25 PR00449 Ras GTPase
IPR001806 27 43 PR00449 Ras GTPase
IPR001806 45 67 PR00449 Ras GTPase
HMMPfam IPR013753 5 106 PF00071 Ras
HMMSmart IPR003577 1 134 SM00173 Ras small GTPase
IPR003579 4 138 SM00175 Ras small GTPase
IPR003578 6 142 SM00174 Ras small GTPase
HMMTigr IPR005225 1 152 TIGR00231 Small GTP-binding protein domain
ScanRegExp IPR002078 6 19 PS00675 RNA polymerase sigma factor 54
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